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How/why does God prune us?

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In John 15:1–11, Jesus employs an allegory of a vine and branches to communicate the importance of abiding in Him—the true vine. To ensure maximum fruit production, the Father does two things: 1) He removes unfruitful branches, and 2) He prunes fruitful branches (verse 2; cf. Hebrews 6:7–8). To understand how and why God prunes believers, we need to review the context of John 15:1–11 and related passages.

In horticulture, pruning is a practice in which dead or overgrown branches are removed from a plant to promote growth and fruitfulness. Spiritual pruning, then, is an act whereby the Father removes what is hindering our spiritual growth. It is part of the discipline process in which God molds believers into the image of His Son: “The Lord disciplines the one he loves, and he chastens everyone he accepts as his son” (Hebrews 12:6; cf. Deuteronomy 8:5).

The idea is that the Father, as the vinedresser, lovingly prunes or disciplines those who are already bearing fruit—not for punishment but for purification. Although we are “already clean because of the word” (John 15:3), we must continue to be cleaned through the sanctifying work of the Holy Spirit.

Here, it is helpful to compare John 13:1–11 and John 15:1–11. In the former passage, Jesus washes the disciples’ feet, signifying the washing of sins through His sacrificial death. The recurring motif of cleansing connects John 13 and John 15. Those who have been washed in the blood of Jesus still need daily cleansing for their sins. Metaphorically, they need their feet washed; they need their branch pruned. “Every branch that does bear fruit he prunes so that it will be even more fruitful” (John 15:2).

The concept of being pruned, disciplined, and cleansed is found throughout Scripture. In Ephesians 5:26–27, for instance, the apostle Paul writes that Christ cleansed the church (i.e., believers) “by the washing of water with the word, so that he might present the church to himself in splendor, without spot or wrinkle or any such thing, that she might be holy and without blemish.” God prunes us to make us holy as He is holy (1 Peter 1:16).

The writer of Hebrews says that “the word of God is living and active, sharper than any two-edged sword, piercing to the division of soul and spirit, of joints and marrow, and discerning the thoughts and intentions of the heart” (Hebrews 4:12, ESV). The “word of God” acts as God Himself, revealing “the thoughts and intentions of the heart.” God prunes us through His Word to make our thoughts true, honorable, just, lovely, commendable, excellent, and worthy of praise (Philippians 4:8).

All gardeners want to see a harvest. Fruit is the reason for the effort and expense of growing a garden in the first place. A wise gardener will know when, how, and what to prune from the plants in order to maximize fruit production. Our Father in heaven is the wisest of gardeners. He knows exactly what we need to be rid of. He knows precisely how to make the cut. And He knows the best time for the necessary pruning. His goal is that we be “filled with the fruit of righteousness that comes through Jesus Christ—to the glory and praise of God” (Philippians 1:11).

All pruning seems like loss to us. We may lose comfort, as God pushes us into a challenging situation. We may lose a friend, a job, or a possession. God’s pruning may involve loss of opportunity as He closes a door. We may lose health or wealth. There are any number of ways that God can prune His branches, redirect our priorities, and increase our spiritual sensitivity. The question for the branches is always, “Are you ready to grow?”

As we reflect on how and why God prunes us, we are reminded that the pruning process, painful though it may be, is not for punishment but for purification. This is why, in John 15:11, Jesus says, “These things I have spoken to you, that my joy may be in you, and that your joy may be full” (ESV).

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How/why does God prune us?
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This page last updated: May 5, 2025